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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network (ESnet) have been … HPCwire Readers’ and Editors’ Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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DOE JGI Metagenome Workflow
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . … used for systemic orthology to enable use for both cacao functional biology and breeding.     …
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
… While summer interns at the JGI from multiple programs had their own goals to achieve, … they constantly collaborated with each other on new ways of presenting and researching science. …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… and Engineering Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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Leo Baumgart
… his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and … diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … insights, thoughts, and explorations that has led to groundbreaking science and opportunities to speak on a … “confident in themselves and their research” during their final presentations and beyond. Before breaking for the …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … soil enrichment, is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a FICUS …
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An Integrated Dataset to Understand Ecosystem Interaction
… ( Populus trichocarpa ) trees, as well as the soil surrounding their roots (known as the rhizosphere), researchers … and metabolites associated with the tree’s stress response. Finally, using transcriptomics, researchers were able to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Axel Visel
… Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … University of California, Merced. Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … mycocosm? or specific groups? A: While are still working on finalizing the tree and related publication the tree is … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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