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Science Programs
The JGI’s Science Programs offer support to users and their … of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for … the JGI’s impact in advancing both user science and the DOE science mission. Prospective users are encouraged to …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … broader ecosystem perspective, involving more multidisciplinary teams. The work also paved the way for a longstanding …
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA Synthesis, and Metabolomics) as well as Research & …
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Neha Varghese
… role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user … and implementation of microservices in conjunction with the IMG platform. …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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De novo DNA synthesis using polymerase-nucleotide conjugates
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user … the goal of this work is to develop tools, curated databases, and streamlined workflows that allow researchers …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … into sustainable biofuels . For its importance to the DOE mission, switchgrass is among the JGI Flagship Plants . …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to …
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BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes
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