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Draft genome sequence of Muricoccus roseus DSM 14916T, isolated from a children’s care center in Finland
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Graduate Students Get Thesis Research Opportunity at the JGI
… pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have access to unique lab … Production in California’s Canal System,” she will work with Susannah Tringe, JGI’s User Programs deputy and head of … in wetland carbon cycling and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s …
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Making a Lichen Together
… Photobiont and fungus (mycobiont) live intertwined, with the photobiont transferring part of its … . To explore the genomes, Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the … seconds or minutes — a trait that could help improve crop drought resilience. It’s a superpower even Marvel’s …
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JGI@25: Building a Better Bean
… . “Common beans are a major societal crop for those with severely limited income,” McClean said. “Common bean is … America and Eastern Africa. For smallholder farmers — those with less than two hectares of land — common bean is often a … fueled further research into disease tolerance in crops, drought- and stress-resistance as well as nitrogen fixation; …
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Doubling Down on Known Protein Families
… wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … “So, that diversity is definitely holding a lot of new secrets in terms of functional diversity as well.”  …
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Ben Bowen
… T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. … Diabetes, 59(1), 33–42. Bowen, B., & Northen, T. (2010). Dealing with the unknown: metabolomics and metabolite atlases. …
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Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes
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JGI Scientists Pen Genome Watch Articles
… Seshadri. Writing the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  … Du Toit, senior editor for  Nature Reviews Microbiology, with an unusual opportunity: would JGI researchers consider … the column had been written solely by scientists affiliated with the Wellcome Sanger Institute in the UK — a nonprofit …
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Mining Metagenomes for Cas Proteins
… of California (UC), Berkeley, which is also affiliated with the Innovative Genomics Institute. The Impact The … areas. In particular, gene editing is being used to develop drought, flooding, pest-resistant, and better-yielding … study senior author Jennifer Doudna’s lab, and he worked with co-first author David Burstein, then a postdoctoral …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …
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An Earth Month Look at Sustainability Efforts at the JGI
… challenges. And many JGIers work to connect those big goals with their everyday activities, striving for sustainability … that works to prepare the IGB to be the first Lab building with laboratories where 90% of landfill waste is diverted to … in mind, they’re focused on easy-to-maintain, drought tolerant plants that can also provide shelter to …
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Axel Visel
… of scientific policy, engaging in interactions with the scientific community at large. … Wang Z, Visel A (2013). De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave …
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