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JGI@25: A Single Cell, Myriad Microbial Discoveries
… Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI … genomic information into biological function. The  New Investigator and Functional Genomics calls do not …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal … work work it out 2.  Q(uestion): Do you publish the data sets the trees are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree …
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You Can Move, But You Can’t Hide
… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by killing … of new viruses and plasmids quickly, even in massive datasets. geNomad employs two distinct approaches to identify …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial … of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly available data, … GenomeOcean encompasses approximately 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for … process these little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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The future of legume genetic data resources: Challenges, opportunities, and priorities
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources
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Obtaining Comparative Genomic Data with the VISTA Family of Computational Tools
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