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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Plant Pan-Genomics Comes of Age
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Ian Blaby
Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … availability to carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., … 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, …
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JGI-UC Merced Interns Share Their 2021 Experiences
… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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Massie S. Ballon
Massie S. Ballon is the Communications and Outreach Manager at the JGI. Prior to … UC Managing Implicit Bias Certification 2020-present, Project Management Professional (PMP) Credential Graduate …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … through the  CSP New Investigator call . It is the first project to have successfully evolved into a full-scale … range of environments. A similar proposal focused on diatom genomes from  Thomas Mock of the University of East Anglia …
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Len Pennacchio
… joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He holds joint appointments as a … generated one of the first mouse models for this common neurological disorder. In 1999, he was named a DOE …
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