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Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Ian Blaby
National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide … to carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a …
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Adopt-A-Genome
… research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start orientation as a … will present their research findings in a special and dedicated session of the QSB Fall Retreat that will take place …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight … investigator, she is committed to representing and advocating for early career users on the UEC. As a user of the …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … SCGSR awardee, Ian Rambo from Brett Baker’s lab at the University of Texas-Austin. Rambo will be studying the … Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory, have … is part of another project led by Owen White at the University of Maryland, Baltimore. Both projects will build …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … 28, 2022, in Cell , a team led by researchers at Tel Aviv University in Israel, the National Center for Biotechnology … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … growing off the coasts of Alaska and Norway, as well as California and Mexico. Based on the study, it would seem … Alaska.  Upon its arrival in Alaska, eelgrass quickly relocated to the Atlantic ocean through the Bering strait, which …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … (SIP) has opened vast windows into specific activities catalyzed by microbial communities. By pairing RNA or DNA … Pacific Northwest National Laboratory, Northern Arizona University, Argonne National Laboratory and the JGI.  With …
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