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Toward More Efficient Artificial Photosynthesis
… it as a sustainable resource for making high-value bioproducts. As a step toward the long-term goal, researchers are … chloroplast platform allows researchers to mass produce identical droplets that serve as reaction chambers, and … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the world, for …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
… or else are interested in participating in the famous JGI-UC Merced internship program. …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… future. Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari … the human genome.  By 2000, a drafted human genome was produced by a joint effort between public and private sectors … with the FICUS program, through which researchers can access multiple DOE facilities with a single proposal. From …
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A Model System for Perennial Grasses
… chromosomes. Switchgrass has deep roots that allow it to access nutrients easily from a variety of soils and has a high tolerance of extreme water conditions such as drought and floods. The U.S. Department of Energy … that influence adaptation and tolerance to stressors such as drought. This information can be applied toward …
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Uncovering Novel Genomes from Earth’s Microbiomes
… work results from a collaboration involving more than 200 scientists, researchers at the U.S. Department of Energy … called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) … these samples, many of which come from unique, difficult to access environments, and invited these researchers to be …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… trait for domesticated crops because it leads to reduced harvest yields. Over thousands of years, farmers have … a large-scale genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome … their involvement; it’s something we wouldn’t have even started.”  The reference genome of Setaria viridis is …
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A Collaboration to Improve Plant Genome Annotations Across Species
… *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In fact, HudsonAlpha Faculty … Sarah:  How many plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, … in currently available 17 other species. And you can also access the differentially expressed genes and visualize …
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A Sorghum Pangenome Opens More Doors to Discovery
… holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … its strengths into other crops for biofuels and bioproducts. Historically, work on sorghum has focused on producing … and the phenotypic diversity across this plant in one accessible resource,” said John Lovell, a Research Faculty …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … hosts that users can select to be engineered. “Piloting access to this emerging technology with JGI users will … versatile engineering system that allows scientists to conduct genome-wide screens and explore biosynthetic pathway. …
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First Monoploid Reference Sequence of Sugarcane
… on a genotype with two identical sets of chromosomes to produce a monoploid reference sequence. For the highly polyploid … sugarcane, an international team of researchers has successfully assembled a first monoploid reference sequence … related species – sorghum. The Impact Sugarcane produces 80 percent of the world’s sugar, which is of interest …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… collaboration between JGI and the ExaBiome team. “They produced fantastic scientific results this year by assembling a collection of large datasets that will enable scientists to explore and collect data in new ways,” she … professor of electrical engineering and computer science at UC Berkeley and Berkeley Lab scientist who currently leads …
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