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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. … and Development Program of Berkeley Lab, among other organizations. …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The … peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall …
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2022 Progress Report
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, …
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Conversion of Amazon rainforest to agriculture alters community traits of methane‐cycling organisms
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Microscopic Algae as New Emerging Models for Studies of Organic Biocrystallization and Vision
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Improving the Cacao Genome and Phytozome
… exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production in … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … scores of nurseries across the nation, elevating concerns about the pathogen to an all-time high. California … engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … The DOE has been similarly invested in environmental management, contributing to bioremediation efforts for … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Microbial communities and biogeochemical functioning across peatlands in the Athabasca Oil Sands region of Canada: Implications for reclamation and management
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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