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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … cycling across the planet. Summary To understand more about how archaeal hosts and hitchhikers coexist, …
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The Case for Conservation
… crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact Found on all … HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the fire moss …
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DOE JGI Interns Share Their Summer Experiences
… of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to … part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two … groups, respectively. Each of the interns spoke briefly about their time at the JGI at …
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Decoding Yellowstone’s Microbial Mats
Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the microbial mat denizens.  …
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From Competition to Cooperation
… walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of plant-host and …
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DOE Metrics
… hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of the genome …
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JGI Announces 2023 Community Science Program Awardees
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … success. “ The CSP Annual Call is focused on large-scale genomic science projects relevant to the DOE’s Office of … nutrient cycling, and biogeochemistry. You can learn more about this year’s recipients on our Twitter. Samples were …
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Homologous Recombination and Transposon Propagation Shape the Population Structure of an Organism from the Deep Subsurface with Minimal Metabolism
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Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
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Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration
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Organic sulfur fingerprint indicates continued injection fluid signature 10 months after hydraulic fracturing
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