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The fungus that made itself at home
… to thrive in manmade environments. As reported January 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In …
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JGI Workshop at SIMB NP Meeting
… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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Three Join the JGI User Executive Committee
… in metagenomics and novel applications for long-read DNA sequencing. As a UEC member, Wilbanks will advocate for … Greenham stepped down at the end of her term. In late 2023, the JGI launched a solicitation for nominations for …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis … (INRAE) and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California …
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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …
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10 From JGI on the 2019 Highly Cited Researchers List
… the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … the minimum amount of information for an uncultivated virus genome, including the source, methods of identification of …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Webinar: Introducing the BioSANS capability
… Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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