Results

Diversity of genomic adaptations to the post‐fire environment in Pezizales fungi points to crosstalk between charcoal tolerance and sexual development
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Metagenome-Assembled Genomes for “Candidatus Phormidium sp. Strain AB48” and Co-occurring Microorganisms from an Industrial Photobioreactor Environment
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Genomic comparison of deep-sea hydrothermal genera related to Aeropyrum, Thermodiscus and Caldisphaera, and proposed emended description of the family Acidilobaceae
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Expanded genome and proteome reallocation in a novel, robust Bacillus coagulans strain capable of utilizing pentose and hexose sugars
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A Chromosome-Scale Genome Assembly of the Flax Rust Fungus Reveals the Two Unusually Large Effector Proteins, AvrM3 and AvrN.
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Steven Wilson
… and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data … Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at Exelixis Biopharmaceuticals as an intern, …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the reference fungal  genome . …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria … a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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