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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing … to drive more productive food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria Streptomyces is more … The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI-UC Merced Interns Share Their 2021 Experiences
… UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … in professional development enrichment activities. For some students in the 2021 cohort, this was their first … Evolution of the Mitochondria Internship …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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UC Merced Interns Reflect on Their JGI Summer Projects
… with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop presentation skills as well as … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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2025 NeLLi Symposium
… students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and … Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest … Immediately following the NeLLi Symposium, join us for a 1.5–day jamboree on November 6–7 focused on improving …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total* …     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … 2019 in Nature Communications , two research teams joined forces and data sets to describe bacterial genomes for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Virus-Microbe Interactions of Mud Island Mangroves
… program , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. Baker had worked with … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …
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