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… This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … fostering academia-industry collaborations.” A third story from the issue — Machine learning-based prediction of …

… first paper that describes sorghum’s response to drought, from a large-scale field experiment to uncover the … experiment is led by a consortium involving researchers from the University of California (UC), Berkeley, UC … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …

… of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … the common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an … Six races of the common were identified, three from each of the common bean’s two points of origin in …

… Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … year’s recipients on our Twitter. Samples were collected from across a permafrost age gradient from the Fox permafrost tunnel near Fairbanks, Alaska. …

… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on sequence reads to link …

… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … user facility, 24 large-scale proposals have been accepted from 70 full submissions based on 92 letters of intent. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a parasitic interaction with their soil fungus host, … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also highlight … that at each of eight genes, having a single version from S. cerevisiae was sufficient to promote growth at high …

… Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of … cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over 27,000 … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …

… Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad … to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of those was a …