Search

… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the … So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …

… is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … HT-SIP is a capability available to request through  the JGI proposal calls . … The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …

… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint … of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Implementation of the Index of Cell Identity as an R package …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal …

… downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  …

… Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant … Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and …

… switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, …

… Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of … utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …

… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user …

… Congratulations to Susannah Tringe , one of eight scientists and engineers who received … Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s …

… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This … BS in Electrical Engineering, University of New South Wales, Australia; MS in …