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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar … to some extent, the water availability, temperature variations etc are all more extreme in the field. By having … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Learning to Look
… to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … Simon Roux, a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are … the Perception of Inovirus Diversity The results revealed inoviruses are in every major microbial …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… microbiomes. Scientists conducted a shotgun metagenomic survey on three types of conifers–limber pine, … the leaf surface to broader forest and ecosystem processes revealed through their diverse genomic capabilities. Summary In a project supported by the …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Graduate Students Get Thesis Research Opportunity at the JGI
… is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s … of understanding how engineered environments contribute to greenhouse gases,” Kaze said. “It’s an exciting time in the … dynamics at the terrestrial-marine interface, which at a larger scale may be applicable towards carbon, and …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in … may be involved in venom activity, which is part of a larger consortium Ul-Hasan has started, known as the … the research of 13 JGI scientists through the JGI-UC Merced Genomics Internship.     …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI at the AGU Fall Meeting
… Roscioli, Aerodyne Research Inc.: “Connecting above-ground greenhouse gas fluxes with subsurface nutrient cycling at an … of Arizona: “Spatial metabolic profiling in roots reveals plant specific responses to drought at the Biosphere …
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A Plant Root Atlas for Tracking Developmental Trajectories
… National Laboratory (Berkeley Lab). “This represents the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he … developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be available for …
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Triggering Morel Fruiting
… JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … mechanisms of morel with multi-omic approaches, our results revealed a striking capability of morel mycelium to acquire … consumed during morel fruiting. The above observation revealed a high capability of morel to mobilize organic …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the … data from the precious Olpidium zoospores remained largely untouched until seven years later. In 2018, as … weakly. Further investigation on the source of controversy revealed that the branches among Olpidium and the first few …
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