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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, …
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Rex Malmstrom
… bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. After joining the JGI, … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … and AI for large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of …
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Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control
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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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