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… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, …

… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …

… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … this collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom … cylindrus . At that time, they noted that the F. cylindrus genome encoded more proteins requiring zinc than non-polar …

… Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Genomes from uncultivated bacteria offers clues to ancestral … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria … At the same time, working with researchers from the Bigelow Laboratory for Ocean Sciences, Microbial Genome …

… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so … collected at each sampling site, were compiled into the Genome Resolved Open Watershed database (GROWdb). The team …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User … had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The results revealed …

… Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … and Verstraetearchaeota lineages. The archaeal genome was detected in samples collected by Stephen Quake’s … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them …

… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing …

… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …