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… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI …

… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, …

… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety …

… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play … pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado State University GI users …

… JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute (JBEI). … analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar …

… hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …

… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … One other finding that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …

… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health …

… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …