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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … mechanisms of sex determination could also lead to new approaches to accelerate flowering, which can speed the …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … based on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  synthesis and …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha … for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to …
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools and …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell …
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Robert Bowers
Bob uses single-cell genomics and metagenomics to explore how microbes influence … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … staying up to date via our website, social media, and newsletter. Q:  How would people find out about the NEON … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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