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JGI Scientists Pen Genome Watch Articles
Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … hot topics in genomics.” And it makes sense to Woyke why JGI would have this role. “We work with leaders in … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Generation of Transcript Assemblies and Identification of Single Nucleotide Polymorphisms from Seven Lowland and Upland Cultivars of Switchgrass
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A Single Nucleotide Change in the polC DNA Polymerase III in Clostridium thermocellum Is Sufficient To Create a Hypermutator Phenotype
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … with Cole and Serrano to collect and analyze the single nuclei and spatial transcriptomics data this work …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … a Genome Insider podcast minisode. To date it is the single largest effort to provide a cataloged and curated … rumen microbes are awesome and this is just another example why.” …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of … by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI collaborators. This work … combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …
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A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyo n
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How to Target a Microbial Needle within a Community Haystack
… developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of microbes that …
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