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Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination
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Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition
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JGI Launches Latest Strategic Plan
… over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … the JGI’s next petabase will likely be achieved in the next three years, if not sooner!” Click here to download a copy …
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Jeremy Schmutz
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement. Nature … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology … Nature 2010;463:763-8. Schmutz, J et al. 2010. Genome sequence of the palaeopolyploid soybean. Nature 4637278: …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more organized. “The big … took on the challenge to visualize these giant cells in three dimensions and at relatively high magnification. Using … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA … alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ type-strain deposits. All of these …
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JGI announces 2024 New Investigator portfolio
… our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned …
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JGIota: Sequencing Shiitakes with David Hibbett
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Learning to Look
… and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What … to those in typical bacterial or archaeal genomes, the sequence is most likely not an inovirus. But if these nearby …
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Targeted single‐cell sequencing
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Introduction: Sequences and consequences
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Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
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