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Fungus Fuels Tree Growth
… always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program in … from  M. elongata;  the fungus produces them so prolifically, it oozes. The team hypothesizes that lipids could act …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… recover high value products from human waste. They   genetically modified yeast to efficiently convert elements present … by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the … of separating urine from other waste streams and recovering resources that could be used for products such as …
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Cataloging the Microbes that Manage the Health of River Systems
… States. They also provided multiple access points to the information. The team harnessed a community-science program to … not only how researchers can successfully partner with DOE user facilities and resources on such large-scale multi-omic data efforts, but …
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Sequencing Submission Requirements for DNA Synthesis
… Sequence files for all constructs should be emailed to  Miranda … File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop …
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Gut Fungi: Unexpected Source of Novel Chemicals
… poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI announces first round of 2023 New Investigator awardees
… circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals —  through the  New Investigator call under our Community Science Program.  Below find a list …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get … Lastly, students will learn how they can start using these resources to track their contributions to their benefit. …
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Gotta Catch 'Em Gall
… (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into … that program oak trees to raise their young in structures called galls.  In this episode, hear from Kasey and Patrick … this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird …
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Digging into Microbial Ecosystems Deep Underground
… these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his … approved through a collaborative science initiative called Facilities Integrating Collaborations for User … . Through FICUS, the researchers have tapped into the resources and capabilities of both the JGI and the …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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