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How Filamentous Fungi Sense Food
… the order in which this fungus breaks down plant cell wall materials including lignin, cellulose and hemicellulose. The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… economically important because of their use in industrial materials, pharmaceutical products, and as biofuel … at the DOE Joint Genome Institute, a DOE Office of Science User Facility, revealed the largest number of TPS genes of … desirable from a biofuels production perspective. By using genomic database alignment tools, researchers searched for …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… as to better enable the mining of critical minerals and materials. The precise gene-targeting capability for … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test … oil production. The organism uses specific chemical tags on DNA  to control which genes are active. Researchers also …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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De novo DNA synthesis using polymerase-nucleotide conjugates
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the …
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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina.
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Methanogens implicated by DNA evidence
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Building Sphagnum Genomic Resources
… (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … mimicking an array of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly … Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial …
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