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GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits
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Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies
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Synthetic Biology Lab
… pipelines bringing in new technologies, in particular through adoption of lab automation enabling ever-higher levels of throughput. We also develop methods for efficient QA/QC … hosts, by combining combinatorial synthesis, high-throughput screening methodologies, and statistical …
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Nikos Kyrpides
… the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. … Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant virus diversity and host interactions through global metagenomics. …
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Phylogenomically Guided Identification of Industrially Relevant GH1 β‑Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry
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Kjiersten Fagnan
… on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
DPANN superphylum of Archaea. This pair is abundant in two subsurface ecosystems in very different parts of the world: … in part by the Allen Distinguished Investigator Program, through The Paul G. Allen Frontiers Group, the National …
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic … cycles that fuel the planet, and viruses control them through infection, but little is known about the impacts of … As part of efforts to characterize global microbial diversity with an aim to improve predictive ecosystems …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the … paper is the first one to survey a huge amount of natural diversity and say, ‘Yeah, there are genes out there that … and then mapping back to identify candidate genes.”  Through the JGI’s Community Science Program , sequences of …
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