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In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab … the dispersed oil.   Terry Hazen on Oceanospirillales microbes   Terry Hazen Perspective on the Deepwater Horizon …

… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … enediynes to the market in 2001 with a drug called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a …

… use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like sequences compared to the 56 previously known inovirus genomes. “These genomes are so …

Program Product Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of …

… in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … green sharpshooter. In 2012, single cells isolated from the microbes found in the oil plume from Deepwater Horizon oil … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI users …

… the genomes and predict the metabolic abilities of these microbes. The Impact This study illustrates how the research … interactive browser – contains the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …

… were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … the study highlights the vast functional diversity of microbes by looking at protein function within them. …

In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re … Institute, or JGI.  Two special days occur in April: the 50th celebration of Earth Day on April 22, and DNA Day on …

… nitrogen-metabolizing enzymes are abundant, and to which microbes they belong. This study provides further insights … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … than expected. The transcriptome data had suggested about a 50/50 split between fungal and bacterial enzymes. Yet, they …

As warm-adapted microbes edge polewards, they’d oust resident tiny algae. … they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to determine what genes the algae … waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the …