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Pinning Down a Piece of Photosynthesis
… a similar region —  a domain of unknown function, DUF2470. In the world of proteins, a domain of unknown function … into focus. Blaby-Haas and her team hypothesized that DUF2470 was key to iron metabolism, and renamed it to Domain …
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A Natural Mechanism Can Turbocharge Viral Evolution
… sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project …
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A Collaboration to Improve Plant Genome Annotations Across Species
… sets, such as sorghum internode time course data from 4 different genotypes by Dr. John Mullet; Dr. Tom Juenger … additional biological information to an average of 40 percent of genes across Gene Atlas plants. Comparing …
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Boosting Small Molecule Production in Super “Soup”
… to accelerate bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical … than were noted inside the cell. “One of the huge advantages of the cell-free system is that the cells are no …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights … metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the … present in archaea with metabolisms involving methyl-coenzyme M reductase (MCR), the final step in methanogenesis, …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the ocean’s extremes of … findings, like antibiotics, pharmaceuticals, and novel enzymes that function at low temperature.” said Katrin … 5th Assessment Report to predict where and how fast the 14° Celsius boundary is moving. “It’s driven by climate: warm …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… multiple DOE facilities with a single proposal. From the vantage point of JGI’s 25 years fueling discovery, Anderson … milestones of Hamilton Smith’s discovery of restriction enzymes in the 1960s, as well as Jill Banfield and Jennifer …
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Doubling Down on Known Protein Families
… (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire … pivotal applications in biotechnology, such as DNA editing enzymes.” Leveraging Protein Families in a New Way The …
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JGI-UC Merced Interns Share Their 2021 Experiences
The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage Specific …
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