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JGI@25: Mapping Switchgrass Traits with Common Gardens
… tolerance, and other traits that make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and …
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Natural Prodcast Episode 4: Nancy Keller
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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How Filamentous Fungi Sense Food
… present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial …
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Fungal Friends or Foes in Plant Roots
… can in turn boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office … of the key community participants and enabling future metagenomics studies.   …
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The Case for Conservation
… fruit and seed yield. Conversely, some crops such as bioenergy sorghum may need sterile males; plant breeding …
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A One-Stop Shop for Analyzing Algal Genomes
… for these traits takes us closer to harnessing algae for bioenergy and the greater bioeconomy. By bringing together … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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The fungus that made itself at home
… Due to its aggressive capacity to damage the wood in homes, bioenergy researchers have been interested in harnessing the …
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An Addiction Crucial to a Fungus’ Reproduction
… The origin of this relationship though, is often antagonistic and the parasite first needs to secure its own … Rhizopus is a fungal pathogen of crops, including candidate bioenergy feedstocks sunflower, and maize, and a part of the … JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported …
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Doubling Down on Known Protein Families
… (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire … similar to anything we’ve already defined.  “A huge percentage — around 30–50% of the protein families that we knew so …
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Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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