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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the …
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
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Patterns and drivers of fungal community depth stratification in Sphagnum peat
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Fungal diversity and function in metagenomes sequenced from extreme environments
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Host genotype controls ecological change in the leaf fungal microbiome
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … he established an efficient switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of … , which awards graduate students the opportunity to pursue part of their thesis research at one of the DOE national … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their talks … goals. While he’s very familiar with the JGI’s research portfolio, he admitted that boiling that portfolio’s impact …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led the development of the genome analysis and Bioinformatics core at Integrated …
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Kjiersten Fagnan
… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan was part of the Gordon Bell prize winning team at the …
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Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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