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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … focused on tool development. Specifically, the goal of this work is to develop tools, curated databases, and streamlined …
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … how early plants built upon an ancient genetic framework to thrive outside aquatic environments. The Impact A … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Technologies Opportunity Program (ETOP). Following that work, they partnered once more with JGI Microbial Program …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … partnered with the National Institutes of Health. The DOE works with the National Nuclear Security Administration to …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … engineering,  biofuel production and more. … This work was funded by the US-National Science Foundation grants …
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