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Microbiome Engineering: Synthetic Biology of Plant-Associated Microbiomes in Sustainable Agriculture
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Natural Prodcast Episode 21: Elizabeth Parkinson
… transcripts, and show notes with links to papers around the science we talked about, at natural prodcast dot com. So, … little bit of your background because you do-- you're classically trained as a synthetic chemist. BETSY PARKINSON: Yes. … them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or …
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The emergence of microbiome centres
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Mapping the microbiome milieu
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Expanding Virophage Diversity
… involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high … even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them without …
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Promoting the Power of Viral Metagenomics
… of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos Kyrpides , was  recently … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early …
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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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Atif Shahab
… platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory information tracking, and enables … Management Systems (LIMS), bioinformatics, and genomics data management. He has worked at several renowned …
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A synthesis of bacterial and archaeal phenotypic trait data
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Biases in genome reconstruction from metagenomic data
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AmiGO: online access to ontology and annotation data
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Visualizing metagenomic and metatranscriptomic data: A comprehensive review
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