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Stage-resolved gene regulatory network analysis reveals developmental reprogramming and genes with robust stem-preferred expression in sorghum
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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First Monoploid Reference Sequence of Sugarcane
… genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical sets of … platform (http://southgreen.cirad.fr). For the portion of the work conducted by the Joint Genome Institute and the …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … the sulfur from gasses, they also produce hydrocarbons, the building blocks of many of our fuels and materials.  With an … an enzyme system that was previously only understood at a genetic level. Functional and structural experiments showed …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … rot fungi in the genus Lentinula. Dan Rokhsar looked to the evolutionary history of strawberries as part of a study to …
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Mining Thermophile Photosynthesis Genes: A Synthetic Operon Expressing Chloroflexota Species Reaction Center Genes in Rhodobacter sphaeroides
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … than 5,000 data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the … University, and Koonin both noted that other research in parallel has reported similar “dramatic expansions” of the …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an … conducts comparative genomic research to understand the evolutionary and practical significance of plant pan-genomes …
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Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
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