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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest … goal has been for all this new cotton work, and even the original cotton project was to try to bring in molecular … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi
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Evolutionary history of arbuscular mycorrhizal fungi and genomic signatures of obligate symbiosis
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Testing the evolutionary theory of inversion polymorphisms in the yellow monkeyflower (Mimulus guttatus)
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Estimating DNA coverage and abundance in metagenomes using a gamma approximation
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A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles
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DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes
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Methodology for Extracting High-Molecular-Weight DNA from Field Collections of Macrofungi
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in … a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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