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Olpidium, The Key to the Origin of Terrestrial Fungi
… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … of British Columbia and Dr. Rochon from Agri-Food Canada at Summerland BC aimed to generate whole genome data … root. Upon maturity, the cucumber roots were rinsed with cold water to stimulate the release of zoospores by Olpidium …
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JGI announces second round of 2023 New Investigator awardees
… From left to right: [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin Hammer, … Hazard, Rachel Mackelprang, Brook Moyers, Mei, Ran,; [below] Benjamin Peterson, Dacheng Ren, Allison Rober, Neal … not led any previously-accepted proposals — through the New Investigator call under our Community Science Program .  …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … to an update of  the JGI’s Genome OnLine Database (GOLD ) database that also marked the platform’s 25th …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive … bioreactors. Aside from producing energy that the organisms can use to thrive, the process can result in other end … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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JGI@25: Using Team Science to Build Communities Around Data
… the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations … have been published. Spatafora said the work has “significantly advanced our understanding of 1 billion years of … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Draft Genome Sequences of Five New Strains of Methylophilaceae Isolated from Lake Washington Sediment
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the tried-and-true … Roux says, would be the foundation upon which researchers can develop high-throughput and high-resolution studies of …
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Doubling Down on Known Protein Families
… only able to clearly identify what falls within that single beam. When it comes to microbial communities, scientists … the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now analyze new datasets by comparing against these … But what kind of diversity might those ‘unknown unknowns’ hold?  The team started with 8 billion metagenome genes from …
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Natural Prodcast
… about current and future developments, and how the JGI can be part of that space.   …
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Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
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Draft genome sequencing and assembly of Favolaschia claudopus CIRM-BRFM 2984 isolated from oak limbs
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