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JGI on the 2021 Highly Cited Researchers List
JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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Game On: High School Students Drive Everglades Metagenomics Study
… out to many researchers with the hope of getting support for a research project for his class of 18 juniors.  He got … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, …
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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Functional Annotation of Fibrobacter succinogenes S85 Carbohydrate Active Enzymes
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha … Bennetzen, JL & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Sequencing crop genomes: approaches and applications
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Selection to sequence: opportunities in fungal genomics
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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