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Game On: High School Students Drive Everglades Metagenomics Study
… to adapt when they noticed while collecting the samples on canoes just how much change had occurred in this region since the images … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Methane Makers in Yosemite’s Lakes
… lakes are isolated, but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those ecosystems work. …
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The Busy World of Deep Sea Eruptions
But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal vents — where lively microbial … Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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Back to the Future! A Sorghum Story
John Mullet, a biologist at Texas A&M University, tells us how sorghum’s historical — and literal — roots could play a big role in our energy future. …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… video, UC Merced undergraduate and graduate students share how their summer internship experiences have influenced … helpful and I, I just have so much more confidence and I can say that I’m an app developer and that’s amazing.  … is a, a really valuable experience.  Nathaniel Brown : My biggest concern before I started my internship was whether I …
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2024 Progress Report
… processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … consortium culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron … presented and attended meetings around the world to showcase the JGI’s science and what we enable for our users. …
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Understanding Wildfire Recovery, Starting in Soil
… paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. To get a … of plants and animals, but with climate change driving more extreme wildfires, more and more forests are under threat. … avenues to bring forests back to full function. Foresters can transplant trees and soils, targeting helpful bacteria, …
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JGIota: The Algae Nicknamed ‘Chlamy’
… alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it …
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A Plant Root Atlas for Tracking Developmental Trajectories
Schiebinger at the University of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt … that could help researchers track cell development and how they determine identity, as well as the roles played by … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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JGI Launches Latest Strategic Plan
… its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of the Integrative … KBase in the heart of the Lab’s 200-acre campus—with the big move from leased space in Walnut Creek, Calif. scheduled … JGI’s strategic directions,” said Mouncey. “In this way, we can be more responsive to cross-cutting opportunities, align …
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Ian Blaby
… manifold learning approach to reveal the functional links between gene networks. BMC genomics. 20:12. 2019 Anderson … microbiology . 78: 1, 144-155. 2012 … Editorial Board member of Biology and Synthetic Biology JGI Co-chair, People … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… that could help crop breeders and researchers predict how crops and model organisms may evolve.  Determining the … Session said.  The Kmer Subgenome Identification method can be  accessed here so that, Session said, other … The ancestors are a bit hard to identify and there’s a small possibility that something could be missing from the …
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