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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Webinar: MycoCosm Tutorial
… While are still working on finalizing the tree and related publication the tree is still in development and not … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within … features do you filter? remove/keep and is it possible see original vs. filtered features? A: Filtering of imported …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … : “Redefining Virus Macroevolution” Edward Holmes is an evolutionary virologist at the University of Sydney who has … of 2020. His work has also yielded insights into the origin and spread of viruses like dengue, Ebola, hepatitis …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … control over reproduction was a likely key to this evolutionary transition. Using this model, researchers also … hosts pass on beneficial symbionts between generations. The origin of this relationship though, is often antagonistic …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited … influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … sequencing, I understand. Do you want to tell us about the origin of that, or?   NANCY: Well, so, I’m involved in two …
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SPRUCE-ing Up Science
… a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first … was just beginning to develop and expand into the world of evolutionary biology. And around that time, a collaborative … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the … some fungal species, other fungi will fill in needed functionalities. This work also shows new overlap between …
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