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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … specific features or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s …
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A Plant Root Atlas for Tracking Developmental Trajectories
… , a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at … will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data usage by the …
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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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Webinars on Offerings & Capabilities
… when applying to the FICUS call. (Feb. 21, 2024) More JGI webinars below …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke … metagenome binning software … Education … Selected Publications … Software …
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Natural Prodcast Episode 15: Katherine Duncan
… has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Behind the Paper: Hot Springs Metagenomics
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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