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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … Research (BER) missions. The JGI provides advanced genomic capabilities, large-scale AI-ready data and … Research Centers. He is currently also working with the JGI Metabolomics Program. Having served on JGI, DOE, and NSF …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …
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Ben Bowen
… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. … in spectral alignment, molecular networking, chemoinformatics, and bioinformatics facilitates impactful …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … how research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Silver age of GOLD introduces new features
… matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated microbiome … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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A Complex Confection Decoded: Sugarcane Reference Genome
… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s … conducted by the USA Department of Energy (DOE) Joint Genome Institute …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   ALISON:  Hey! I’m Alison Takemura at the US …
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio …
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Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light
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