Results

DNA Synthesis Program
The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … has a research & development group, a team that develops data science tools, and a user science group. … The JGI has … integrated context.  … The MycoCosm web portal provides data access, visualization, and analysis tools for …
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The Genetically Remote Pathogenic Strain NVH391-98 of the Bacillus cereus Group Is Representative of a Cluster of Thermophilic Strains▿ †
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Game On: High School Students Drive Everglades Metagenomics Study
… through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … to come up with a sense of what to focus on. With so much data and a lack of experience, this added a layer of … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … which microbes are present in a sample, to generate data about which organisms are active, and which microbes … out the onerous SIP sample processing. Generating these datasets opens up the possibility of new insights across …
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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A Community Resource for Secondary Metabolite Researchers
… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … Collaboratory (SMC) has launched as an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Plant Program
… understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind … health. By integrating cutting-edge technologies and data-driven methods, the program equips researchers … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 19: Bill Fenical
… this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …
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Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids
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Picking Up Threads of Cotton Genomics
D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … energy.gov/science/office-science . … Cotton on Phytozome Data Portal …
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