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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and … molecular mechanisms can help researchers better model global carbon and nitrogen cycling. Summary To shed light on … colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy (DOE) Joint …
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … Varga et al (2019) Megaphylogeny resolves global patterns of mushroom evolution. Nature Ecol Evol . … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … understanding of carbon and other nutrient cycles on a global scale. Summary Ace Lake, located in the Vestfold … Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace Lake is covered in …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   … deconstruction. (The JGI also conducted RNA sequencing and alignment to the reference fungal  genome . The study’s …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … major oilseed crop, and important cattle feed crop,” noted David Stelly, another study co-author at Texas A&M … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the … production. Additionally, these fungi play a role in the global  carbon cycle . As decayers, Lentinula fungi access … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … tons of methane a year, which is over half the total global methane production. They are thought to use billions … this approach through the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This … to do in lab is watch our robot. So we have a very simple, programmable robot, which is essentially a little arm with a multi-channel pipette and you can write a program that tells exactly what to do. You can get these …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable properties as a … complete draft genome sequence. At the time, the vital global source of both protein and oil was also the largest …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome …
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David Hibbett
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