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Phylogenetically Driven Sequencing of Extremely Halophilic Archaea Reveals Strategies for Static and Dynamic Osmo-response
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Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for … of virus can suggest a so-called “Kill the Winner” strategy: a virus infects a highly abundant host (a …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … The DNA Synthesis Program plays a central role in advancing … by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The program has …
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Genomic Standards Consortium Projects
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated … Plant microbiomes hold the amazing ability to influence plant … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this …
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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
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Trent Northen
… Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in … large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn …
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Probing the active fraction of soil microbiomes using BONCAT-FACS
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … fill in the gaps,” she added. DSMZ not only preserves a standardized culture collection of international renown, … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean
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