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New keys to unlock the treasure trove of microbial natural products
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … confirmation bias, because it enables scientists to study how methanogenesis takes place in the context of the …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … or how freshwater ecosystems process methane and organic matter.  However, to get all of the information that SIP …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … and particularly how fungi that feed on decaying plant matter (saprotrophs) have transitioned to the symbiotic … (Berkeley Lab). All of the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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New Insights Into the Influence of Plant and Microbial Diversity on Denitrification Rates in a Salt Marsh
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … chemicals not typically found in oceans or soils.  A recent study published in  The ISME Journal     focused on a class …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … and metabolism, work on which she is expanding with her study of microbes in California’s manmade water transport …
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