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Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful … JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A GPU hackathon …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … a set of "secondary metabolites," chemical compounds that often confer specialized capabilities that allow the … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Draft Genome Sequences of 10 Strains of the Genus Exiguobacterium
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in … The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley … Doudna.  Jennifer Doudna , UC Berkeley “We soon realized that we had a powerful tool.” Keynote Talk Title: …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… Santa Barbara discuss the importance of studying anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a …
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Multi‐Omics Analyses Reveal Divergent Molecular Mechanisms Underlying Plant Biomass Conversion by Five Fungi
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory (Berkeley Lab), the National Energy … Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network (ESnet) have been … the release of MetaHipMer, an end-to-end genome assembler that supports “an unprecedented assembly of environmental …
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