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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s … (MIUViG). Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids comprised of cotton A and cotton D genomes. A multi-institutional team including researchers at …
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Nick Everson
… and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating … the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide staff advocacy …
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The Case for Conservation
… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each … and at HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Refining the Process of Identifying Algae Biotechnology Candidates
… multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the United States has … U.S. Department of Energy (DOE) under Contract No. DE-AC36-08GO28308. The work conducted herein by the U.S. Department …
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Finding the Fermenters
… researchers recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … browser that allows other researchers to study the genomes and predict the metabolic abilities of these …
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Three Join the JGI User Executive Committee
… community. Schadt is an environmental microbiologist at ORNL and current chair of the Emerging Ecological Issues … and career stages. The election period concluded on January 8, 2024. …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … and ecosystem health. To facilitate in-depth discussions on future collaborations, an entire afternoon was dedicated to … and Petrus Zwart. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … Amplification (PTA) yields a much higher completion, above 80% in most cases. The Impact PTA is a refined capability …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with …
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