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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … for cutting-edge genomic research — and is capable of discovering and modelling complex biological sequences such … — and primed for integration with artificial intelligence tools.  LLMs aren’t just for understanding the human …
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A One-Stop Shop for Analyzing Algal Genomes
… useful for scientific inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … and its close relative  Populus trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to the … reproduce can help guide breeding efforts. For example, discovering genetic markers of sex enables scientists to …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … at work around the globe Keynote Talk Title : “Wild Microbial Ecology” Microbial ecologist  Bruce Hungate , of … of generating phenazine production.” This led to them discovering that phenazine producers are enriched in the …
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
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Testing for the Genomic Footprint of Conflict Between Life Stages in an Angiosperm and Moss Species
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was … co-organized the NeLLi 2021 Symposium: From New Lineages of Life to New Functions. The seminars focus on experimental …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … level. Scientists might then harness them as molecular tools for research and industry applications. Summary In …
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