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MGM Workshop at Fisabio Summer School
… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … how ecosystems work and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular … and respond to changes in the environment. The Impact Dubbed “the” bioenergy tree, poplars are known for their …
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Extracting the Secrets of Secondary Metabolites
… has historically been limited due to the lack of robust tools available for carrying CRISPR into microorganisms. … and its secondary metabolites work could yield new tools for pest control. Secondary metabolites are highly … monitor loss- and gain-of-function. The study’s analytical data shows peaks and valleys in secondary metabolites as …
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MGM Workshop at Fisabio Summer School 2025
… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … and … that was really the foundation for many of the tools that are available these days and that are widely used … actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate …
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JGI Hosts GPU Hackathon in May
… is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI … Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze these data are diverse and porting these codes to GPUs present …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. … same route. “It was really amazing how the quality of the data improved thanks to that massive amount of new genomes,” …
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Axel Visel
Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in …
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Yasuo Yoshikuni
… and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe …
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A Grass Model to Help Improve Giant Miscanthus
… genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from … Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), a Department of Energy (DOE) Bioenergy Research … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …
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JGI announces second round of 2023 New Investigator awardees
Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why …
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