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… Trained on environmental data, a new JGI tool more accurately facilitates microbial … of microbial life. By leveraging massive user-generated datasets at the JGI and other publicly available data, … GenomeOcean encompasses approximately 645.4 Gbp of high-quality contigs from diverse sources, derived from 219 Tb of …

… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by killing … of new viruses and plasmids quickly, even in massive datasets. geNomad employs two distinct approaches to identify …

… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available … and recovered more than 3,000 others from environmental datasets. All of the annotations and data  are publicly … for researchers who previously lacked access to high-quality mitochondrial annotations. Summary Mitochondrial …

… who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science … are accepted year-round for this ongoing call; the next deadline for proposal submission is Sept. 8, 2026, for …

… Historically, work on sorghum has focused on producing high-quality reference genomes. By cataloguing a genome sequence … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across geographic … for future analysis and discovery. “We're building the data sets that are needed to build the algorithms of the future. …

… in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of “intact” high-molecular weight … sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for … part of our data analysis plan mapping of short-reads datasets (metagenome or metatranscriptome) to a relevant …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the … “When I originally envisioned the project of the class, I knew that I wanted them to write a final paper that  could be …