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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … that thrive in the very salty waters of Deep Lake to better understand how they’ve adapted to these conditions, …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea … collected 40 samples from five oceanic regions to better understand how these hydrothermal ecosystems function … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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JGI@25: From Life at the Extremes to Editing Genomes
… National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … models. Next, the researchers are working towards better understanding how nutrient availability, or lack …
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Mapping the Earth’s Hidden Fungal Kingdom
… written in a yet-to-be-deciphered language. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … in genomics and multi-omics, phenotyping and AI we should better understand fungal biology. Moving toward 10,000 …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  … National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … automation lets researchers study more samples and provides better resolution by splitting the DNA into more density …
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The microbial ecology of permafrost
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