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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … hosts that users can select to be engineered. “Piloting access to this emerging technology with JGI users will … versatile engineering system that allows scientists to conduct genome-wide screens and explore biosynthetic pathway. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… trait for domesticated crops because it leads to reduced harvest yields. Over thousands of years, farmers have … a large-scale genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome … their involvement; it’s something we wouldn’t have even started.”  The reference genome of Setaria viridis is …
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Uncovering Novel Genomes from Earth’s Microbiomes
… work results from a collaboration involving more than 200 scientists, researchers at the U.S. Department of Energy … called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) … these samples, many of which come from unique, difficult to access environments, and invited these researchers to be …
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A Collaboration to Improve Plant Genome Annotations Across Species
… *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In fact, HudsonAlpha Faculty … Sarah:  How many plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, … in currently available 17 other species. And you can also access the differentially expressed genes and visualize …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
… or else are interested in participating in the famous JGI-UC Merced internship program. …
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VEGA Symposium
JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring … for the event photos. Keynote Speakers Katrine Whiteson , UC Irvine Chase Morgan , UC San Diego Britt Koskella , UC Berkeley Other Confirmed …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… intensifying collaborations in the fields of genomics, structural biology, bioimaging, and water research. The meeting … challenges.”  During the workshop UDE and Berkeley Lab scientists discussed a diverse range of topics related to … applications, for example, or the timely controlled start of a biochemical reaction which can then directly be …
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JGI Welcomes New UEC Members
… on JGI policies and practices that affect users and their access to technical capabilities JGI offers, as well as … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to study microorganisms that can’t be cultured by …
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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the … This year’s project goals range from improving crop productivity for bioenergy through enhanced red-light energy …
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JGI announces 2023 CSP Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … in an effort to create improved varieties for biomass production. He did his postdoctoral studies at the Carnegie … interact with their microbiomes. In addition, his group conducts comparative genomic research to understand the …
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