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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… ultimate achievement. To get to this point requires rigorous research, written skill, above all else, determination. … Grigoriev at the JGI strongly influenced her perspective about what it means to be a scientist. “To see how team … it left a mark on me,” she said. In addition to learning about how to navigate and analyze large genomic datasets …
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I-Min (Amy) Chen
… her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and … S et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, … Data Analysis System in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … .  The latest article, published January 27, is about engineering plants and their microbiomes for more … Sanger Institute.” Last year for the column, Woyke wrote about the research field’s move toward characterizing the …
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High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395T (DSM 45146T)
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Examples: Successful LOIs & Submissions
Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared with … of simplified soil communities with high and low carbon use efficiency across differing moisture treatments … … Submission … CSP Functional Genomics Submission … FICUS Example #1 … FICUS Example #2 …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … author Avinash Sreedasyam, a HudsonAlpha senior scientist, about the project. The story is reposted here in modified … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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Ian Blaby
… the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … a group lead at Brookhaven National Laboratory where he focused on functional genomics of phototrophs. Through this and … for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We … head of the Microbial Genomics Program, is enthusiastic about new collaborative projects: “We are excited to …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …
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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three new … of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Genomics of Energy & …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that …
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